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Latest News

Spiegel article mentions CUBI work Jun 7, 2022

Article in the news magazine “Der Spiegel” mentions VarFish and how it is used in rare disease applications.

Spatial Transcriptomics Grant May 1, 2022

CUBI team member receives grant for spacial transcriptomics

Varfish Release v1.2.0 Apr 12, 2022

We are happy to announce the first stable release of VarFish v1.2.0. This is the first stable “version 1” release and many features have been added since the last release.

Next R Crash Course in November 2021 Oct 26, 2021

We are continuing with another installment of the R crash course.

Presenting the Molecular Tumor Board at VICC Jul 21, 2021

On June 29th 2021, the Charité Comprehensive Center and the Core Unit Bioinformatics presented during the VICC ClinGen Somatic Virtual Molecular Tumor Board, which is part of the ACMG Education Center and organized by members of the Variant Interpretation for Cancer Consortium. In particular, Drs. Michael Ruschel and Manuela Benary and Prof. Serge Leyvraz introduced the molecular tumor board at Charité, Berlin and current national studies on precision oncology. Afterwards they presented a recent case with an NTRK fusion, highlighting the need for precision oncology and communication within an interdisciplinary team.

Next R Crash Course in April 2021 Mar 29, 2021

This is the second installment of the R crash course.

Varfish Release v0.23.0 Mar 1, 2021

We are happy to announce VarFish Release v0.23.0. The key feature of this release is the export of Clinvar XML from user annotation data with very few clicks. This release also includes new external service integration and various bug fixes.

Greatly Simplified VarFish Installation Feb 12, 2021

By providing Docker Compose and prebuilt database files, installing a VarFish server is now really simple.

Course Feb 1, 2021

Next R Crash Course in March 2021

Paper Nov 16, 2020

SODAR-Core technology paper published in JOSS