2018

Holtgrewe, M., Knaus, A., Hildebrand, G., Pantel, J.-T., Rodriguesz de los Santos, M., Neveling, K., Goldmann, J., Schubach, M., Jäger, M., Couterier, M., Mundlos, S., Beule, D., Sperling, K., Krawitz, P. (2018) “Multisite de novo mutations in human offspring after paternal exposure to ionizing radiation”, Nature Scientific Reports. 2018 Oct 2;8(1):14611. doi: 10.1038/s41598-018-33066-x.

Guneykaya D., Ivanov A., Hernandez D.P., Haage V., Wojtas B., Meyer N., Maricos M., Jordan P., Buonfiglioli A., Gielniewski B., Ochocka N., Cömert, C., Friedrich, C., Artiles, L. S., Kaminska, B., Mertins, P., Beule, D., Kettenmann, H. (2018) “Transcriptional and translational differences of microglia from male and female brains”, Cell reports. 2018 Sep 4;24(10):2773-83. doi: 10.1016/j.celrep.2018.08.001.

Salatzki J., Foryst-Ludwig A., Bentele K., Blumrich A., Smeir E., Ban Z., Brix S., Grune J., Beyhoff N., Klopfleisch R., Dunst S., Surma, M.A., Klose, C., Rothe, M., Heinzel, F.R., Krannich, A., Kershaw, E.E., Beule, D., Schulze, P.C., Marx, N., Kintscher, U. (2018) “Adipose tissue ATGL modifies the cardiac lipidome in pressure-overload-induced left ventricular failure”, PLoS genetics. 2018 Jan 10;14(1):e1007171. doi: 10.1371/journal.pgen.100717.

2017

Mattei D., Ivanov A., Ferrai C., Jordan P., Guneykaya D., Buonfiglioli A., Schaafsma W., Przanowski P., Deuther-Conrad W., Brust P., Hesse S., Patt, M., Sabri, O., Ross, T.L., Eggen, B.J.L., Boddeke E.W.G.M., Kaminska, B., Beule, D., Pombo, A., Kettenmann, H., Wolf, S.A. (2017) “Maternal immune activation results in complex microglial transcriptome signature in the adult offspring that is reversed by minocycline treatment.” Translational psychiatry. 2017 May;7(5):e1120. doi: 10.1038/tp.2017.80.

Mamlouk, S., Childs, L. H., Aust, D., Heim, D., Melching, F., Oliveira, C., Wolf, T., Durek, P., Schumacher, D., Bläker, H., von Winterfeld, M., Gastl, B., Möhr, K., Menne, A., Zeugner, S., Redmer, T., Lenze, D., Tierling, S., Möbs, M., Weichert, W., Folprecht, G., Blanc, E., Beule, D., Schäfer, R., Morkel, M., Klauschen, F., Leser, U. and Sers, C. (2017) “DNA copy number changes define spatial patterns of heterogeneity in colorectal cancer”, Nature Communications. 2017; 8, p. 14093. doi: 10.1038/ncomms14093.

Messerschmidt, C., Holtgrewe, M. and Beule, D. (2017) “HLA-MA: simple yet powerful matching of samples using HLA typing results”. Bioinformatics. 28, pp. 2592–2599. doi: 10.1093/bioinformatics/btx132.

Kammertoens, T., Friese, C., Arina, A., Idel, C., Briesemeister, D., Rothe, M., Ivanov, A., Szymborska, A., Patone, G., Kunz, S., Sommermeyer, D., Engels, B., Leisegang, M., Textor, A., Fehling, H. J., Fruttiger, M., Lohoff, M., Herrmann, A., Yu, H., Weichselbaum, R., Uckert, W., Hübner, N., Gerhardt, H., Beule, D., Schreiber, H. and Blankenstein, T. (2017) “Tumour ischaemia by interferon-γ resembles physiological blood vessel regression”. Nature. 545(7652), pp. 98–102. doi: 10.1038/nature22311.

Yaakov, G., Lerner, D., Bentele, K., Steinberger, J., Barkai, N., Bigger, J., Maisonneuve, E., Gerdes, K., Lewis, K., Dhar, N., McKinney, J. D., Gefen, O., Balaban, N. Q., Jayaraman, R., Balaban, N. Q., Merrin, J., Chait, R., Kowalik, L., Leibler, S., Balaban, N. Q., Allison, K. R., Brynildsen, M. P., Collins, J. J., Nathan, C., Lewis, K., Glickman, M. S., Sawyers, Knoechel, B., Welch, A. Z., Gibney, P. A., Botstein, D., Koshland, D. E., Levy, S. F., Ziv, N., Siegal, M. L., Stewart-Ornstein, J., Weissman, J. S., El-Samad, H., Gasch, A. P., Weinert, T., Hartwell, L., Weinert, T. A., Hartwell, L. H., Lisby, M., Rothstein, R., Mortensen, U. H., Lisby, M., Mortensen, U. H., Rothstein, R., Domkin, V., Thelander, L., Chabes, A., Hendry, J. A., Tan, G., Ou, J., Boone, C., Brown, G. W., Berry, D. B., Gasch, A. P., Lynch, M., Nishant, K. T., Serero, A., Jubin, C., Loeillet, S., Legoix-Ne, P., Nicolas, A. G., Huh, W. K., Janke, C., Lee, S. E., Blecher-Gonen, R., Martin, M., Cherry, J. M., McKenna, A., DePristo, M. A., Lawrence, M., Obenchain, V., Ye, K., Schulz, M. H., Long, Q., Apweiler, R., Ning, Z., Layer, R. M., Chiang, C., Quinlan, A. R., Hall, I. M., Faust, G. G., Hall, I. M., Boeva, V., Boeva, V., Li, H., Koren, A., Soifer, I. and Barkai, N. (2017). “Coupling phenotypic persistence to DNA damage increases genetic diversity in severe stress”. Nature Ecology & Evolution. 1(1), pp. 497–500. doi: 10.1038/s41559-016-0016.

2016

Holtgrewe, M. and Beule, D. (2016). “VCFPy: a Python 3 library with good support for both reading and writing VCF”. The Journal of Open Source Software. 1(6). doi: 10.21105/joss.00085.

2015

Smedley, D., Jacobsen, J. O. B., Jäger, M., Köhler, S., Holtgrewe, M., Schubach, M., Siragusa, E., Zemojtel, T., Buske, O. J., Washington, N. L., Bone, W. P., Haendel, M. a and Robinson, P. N. (2015). “Next-generation diagnostics and disease-gene discovery with the Exomiser”. Nature Protocols. 10(12), pp. 2004–2015. doi: 10.1038/nprot.2015.124.

Last modified: Sep 16, 2018